Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015901455.1_cds_XP_016451484.1_45832
CDS Infomation

[gene=LOC107776148] [db_xref=GeneID:107776148] [protein=LRR receptor-like serine/threonine-protein kinase EFR] [protein_id=XP_016451484.1] [location=complement(join(84356..84705,84814..86707))] [gbkey=CDS]
Sequence

ATGTCCACACTGCTGATCCTAGCACTTGGCAGTAACAGGTTTTCAGGTACTTTACCTTCA
GATTTAGGCCGTGGCATGCAAAACCTAGAAGAATTTTATATTGGAGGGAATAATCTGAGT
GGTTTTATCTCTCCTTCTATCTCAAATTCTTCAAGACTCAGAATACTTGACATCGCTTAC
AACAGTTTCACAGGTCCAATTCCTCAATCACTTGGTAACTTAGAACAGCTTGAGCTTTTG
AACTTGCAGATGAACAATTTTTTTAGCGATTCCTCATTGAGCTTTCTGACATATTTGACA
AGCTGTAGGAATCTAAGAGAAGTCGGTTTTGCTGAAAATCCGTTGGATGGTGTTCTTCCG
GCATCTATTGGAAATTTCTCTGACACTCTGCAAATTTTTTATGGAGAAAATTGTAAACTG
AAGGGCATCATTCCTGAAGAAATTGGTAATCTTACTGGAGTGGCGAAGATGACTCTGTCT
AACAATGAGTTGATTGGACATATTCCAAAAACTGTCCTAGGCATGCTGAACCTTCAAGAA
CTTTACCTAGATAGCAACAAGATAGAAGGAACCATACCAGATGCTATCTGCAATTTAAAG
AATCTTGGAGCACTAGACTTGTCAGGAAATCAGTTTTCTGGTTCAGTGCCACCATGCTTA
GGAAACGTTACCAGTTTGAGGAAACTTTATCTAGCCTACAACAGCCTGAATTGGAGTTTA
CCTTCAAGCTTGGGAAGCCTTGAAGATCTCATAGAGTTAGATGCTTCATCCAATTTATTA
AGTAGGCAAATTCCTCAAGAGATTGGAAATTTAAGGGCTGCTGCACTCATTGATCTGTCG
AAAAATGATTTTTCTGGTGAGATGCCTAGCACTATAGGGGGCTTAGATAAATTGACTAAA
CTTTCTCTGGCACATAATAGATTAGAGGGGCCAATTCCAGATTCATTTGGCAAAATGTTG
GCCTTGGAAGTCTTGGAGTTGTCTTTTAACAATCTTAGTGGTGAAATTCCAAAGCCATTA
GAAGCTCTTAAGAATCTCAAATATCTGAACATCTCATTAAATAAACTCAGTGGAGAGATT
CCCACCGGAGGTCCTTTTGCAAATGCCACGGGTCAATCTTTCTTGTCCAATGATGCTCTT
TGTGGCGATTCTAAGTTTCATGTGCCACCATGTGTCGTCAAATCTACTAAGAGGTCAAAG
AGGAAAAAGGCAATCTTGGCTTTGTACGTCCTTTTGGGAGTGGGGCTGCTATTTCTTGCA
TTAGCCCTTGCATATGTATTTTTAAGATTGCGAAAGAAAAAGAAGAATGCAGGTCAAGCA
GATGTGACTCTGGTCAAAGGGCATGAAAGAATTTCCTATTATGAACTTGAACAAGCAACA
GAAGGATTTAGTGAAAGCAACTTGCTTGGTAGTGGGAGTTTCAGCATGGTCTATAAAGGG
ATGCTTAGGGATGGTACTCTTTTGGCAGCAAAGGTATTCAATGTGCAATTAGAGGGTGCA
TTCAAAAGTTTTGACACAGAATGTGAGATGCTAAGAAACCTCCGCCATCGAAATCTTACT
AAAGTCATCACTAGTTGCTCTAACCTTGATTTCAGAGCATTAGTATTAGAATACATGCCG
AATGGTACACTTGAAAAATGGCTATACTCTCATAACTTTTTCTTAGACATGTTGCAGAGA
TTGAATATAATGATAGATGTTGCATCTGCAATGGACTATCTTCACAATGGCTATTCAACA
CATGTGGTGCATTGTGACTTGAAGCCAAGCAATGTCTTGCTAGATCAAGATATGGTCGGC
CATGTCAGTGATTTTGGCATTGCAAAATTGTTAGGTGCAGGGGAGGCTTTTGTACAAACT
AGGACAATTGCAACCATTGGATACATTGCTCCAGAGTATGGACAAGATGGAATAGTATCT
ACAAGTTGTGATGTTTATAGTTTTGGCATCTTGATGATGGAGACGTTTACACGAATGAGA
CCAAGTGATGAAATATTTACTGGAGACTTGAGCATACGACGTTGGGTTAGTGATTCTTTT
CCAAGTGAGATTCATAAGGTGGTGGATGCTAATTTGGTACAGCCAGTGGATGAACAAACC
GACGCAAAGATGCAGTATATGCTATCTATCATGGAATTAGCTTTGAGCTGCACTGTAGTG
ATACCTGATGCAAGAATTAACATGGAAGATGCTCTTTCAACCCTCAAAAAGATCAAGCTC
CAGTTTGTCAATAGTCGCCACTAG

Peptide Sequence

PEP ID

XP_016451484.1
PEP Infomation

PREDICTED: LRR receptor-like serine/threonine-protein kinase EFR [Nicotiana tabacum]
Sequence

MSTLLILALGSNRFSGTLPSDLGRGMQNLEEFYIGGNNLSGFISPSISNSSRLRILDIAY
NSFTGPIPQSLGNLEQLELLNLQMNNFFSDSSLSFLTYLTSCRNLREVGFAENPLDGVLP
ASIGNFSDTLQIFYGENCKLKGIIPEEIGNLTGVAKMTLSNNELIGHIPKTVLGMLNLQE
LYLDSNKIEGTIPDAICNLKNLGALDLSGNQFSGSVPPCLGNVTSLRKLYLAYNSLNWSL
PSSLGSLEDLIELDASSNLLSRQIPQEIGNLRAAALIDLSKNDFSGEMPSTIGGLDKLTK
LSLAHNRLEGPIPDSFGKMLALEVLELSFNNLSGEIPKPLEALKNLKYLNISLNKLSGEI
PTGGPFANATGQSFLSNDALCGDSKFHVPPCVVKSTKRSKRKKAILALYVLLGVGLLFLA
LALAYVFLRLRKKKKNAGQADVTLVKGHERISYYELEQATEGFSESNLLGSGSFSMVYKG
MLRDGTLLAAKVFNVQLEGAFKSFDTECEMLRNLRHRNLTKVITSCSNLDFRALVLEYMP
NGTLEKWLYSHNFFLDMLQRLNIMIDVASAMDYLHNGYSTHVVHCDLKPSNVLLDQDMVG
HVSDFGIAKLLGAGEAFVQTRTIATIGYIAPEYGQDGIVSTSCDVYSFGILMMETFTRMR
PSDEIFTGDLSIRRWVSDSFPSEIHKVVDANLVQPVDEQTDAKMQYMLSIMELALSCTVV
IPDARINMEDALSTLKKIKLQFVNSRH

Transcript Sequence

Gene sequence data has not been registered.